SRX080070
GSM749381: Ppie-1 LIN-35 YL402 4-2-10 Ad rep3 GFP TGCT

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GFP

Cell type

Cell type Class
Adult
Cell type
Young adult
NA
NA

Attributes by original data submitter

Sample

source_name
Ppie-1 LIN-35:GFP:FLAG whole animal
strain
YL402
Stage
Young adult
chip antibody
GFP

Sequenced DNA Library

library_name
GSM749381: Ppie-1_LIN-35_YL402_4-2-10_Ad_rep3 _GFP_TGCT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
4382589
Reads aligned (%)
61.4
Duplicates removed (%)
24.3
Number of peaks
313 (qval < 1E-05)

ce10

Number of total reads
4382589
Reads aligned (%)
61.4
Duplicates removed (%)
24.3
Number of peaks
314 (qval < 1E-05)

Base call quality data from DBCLS SRA