Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GFP

Cell type

Cell type Class
Adult
Cell type
Young adult
NA
NA

Attributes by original data submitter

Sample

source_name
Ppie-1 LIN-35:GFP:FLAG whole animal
strain
YL402
Stage
Young adult
chip antibody
GFP

Sequenced DNA Library

library_name
GSM749378: Ppie-1_LIN-35_YL402-3-31-10_Ad_rep2.1_GFP_TGCT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

ce11

Number of total reads
1161234
Reads aligned (%)
53.3
Duplicates removed (%)
27.9
Number of peaks
79 (qval < 1E-05)

ce10

Number of total reads
1161234
Reads aligned (%)
53.3
Duplicates removed (%)
27.9
Number of peaks
79 (qval < 1E-05)

Base call quality data from DBCLS SRA