SRX080066
GSM749377: Ppie-1 DPL-1 YL390 4-23-10 Ad rep4 Input ACGT

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Adult
Cell type
Young adult
NA
NA

Attributes by original data submitter

Sample

source_name
Ppie-1_DPL-1:GFP:FLAG whole animal
strain
YL390
Stage
Young adult
chip antibody
None

Sequenced DNA Library

library_name
GSM749377: Ppie-1 _DPL-1_YL390_4-23-10_Ad_rep4_Input_ACGT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
3061797
Reads aligned (%)
98.0
Duplicates removed (%)
4.7
Number of peaks
307 (qval < 1E-05)

ce10

Number of total reads
3061797
Reads aligned (%)
98.0
Duplicates removed (%)
4.7
Number of peaks
309 (qval < 1E-05)

Base call quality data from DBCLS SRA