Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GFP

Cell type

Cell type Class
Adult
Cell type
Young adult
NA
NA

Attributes by original data submitter

Sample

source_name
Ppie-1_DPL-1:GFP:FLAG whole animal
strain
YL390
Stage
Young adult
chip antibody
GFP

Sequenced DNA Library

library_name
GSM749376: Ppie-1 _DPL-1_YL390_4-23-10_Ad_rep4_GFP_ACGT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

ce11

Number of total reads
4285296
Reads aligned (%)
33.8
Duplicates removed (%)
26.7
Number of peaks
1081 (qval < 1E-05)

ce10

Number of total reads
4285296
Reads aligned (%)
33.8
Duplicates removed (%)
26.7
Number of peaks
1082 (qval < 1E-05)

Base call quality data from DBCLS SRA