Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GFP

Cell type

Cell type Class
Adult
Cell type
Young adult
NA
NA

Attributes by original data submitter

Sample

source_name
Ppie-1 EFL-1:GFP:FLAG whole animal
strain
YL445
Stage
Young adult
chip antibody
GFP

Sequenced DNA Library

library_name
GSM749372: Ppie-1_EFL-1_YL445_3-31-10_Ad_rep3_GFP_TGCT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

ce11

Number of total reads
5371132
Reads aligned (%)
57.2
Duplicates removed (%)
22.8
Number of peaks
2448 (qval < 1E-05)

ce10

Number of total reads
5371132
Reads aligned (%)
57.2
Duplicates removed (%)
22.8
Number of peaks
2451 (qval < 1E-05)

Base call quality data from DBCLS SRA