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For hg19
BigWig
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For hg38
BigWig
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Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
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For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: EP300
wikigenes
PDBj
CellType: NB-4
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX080047
GSM749524: p300 untreated NB4 ChIPseq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
EP300
Cell type
Cell type Class
Blood
Cell type
NB-4
Primary Tissue
Blood
Site of Extraction
Bone Marrow
Tissue Diagnosis
Leukemia
Attributes by original data submitter
Sample
source_name
NB4 cells (leukemic), untreated, p300 ChIP-Seq
cell line
NB4
cell type
leukemic cells
treatment
none
chip antibody
anti-p300
antibody vendor
Santa Cruz Biotechnology
antibody lot
B2511
Sequenced DNA Library
library_name
GSM749524: p300_untreated_NB4_ChIPseq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer
Where can I get the processing logs?
Read processing pipeline
log
hg19
Number of total reads
24741387
Reads aligned (%)
57.4
Duplicates removed (%)
39.0
Number of peaks
7292 (qval < 1E-05)
hg38
Number of total reads
24741387
Reads aligned (%)
59.0
Duplicates removed (%)
37.8
Number of peaks
7147 (qval < 1E-05)
Base call quality data from
DBCLS SRA