SRX079888
GSM746582: GATA1 Ter119+ ChIPSeq rep2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Gata1

Cell type

Cell type Class
Embryo
Cell type
Embryonic erythroblasts
NA
NA

Attributes by original data submitter

Sample

source_name
Ter119+ cells
strain
CD1
developmental stage/cell type
Mouse fetal liver cells with the late erythroid differentiation marker Ter119; primary erythroblasts
chip antibody target
GATA1
chip_antibody_provider
Santa Cruz Biotechnology
chip_antibody_catalog
sc-265
chip_antibody_lot
L1609

Sequenced DNA Library

library_name
GSM746582: GATA1_Ter119+_ChIPSeq_rep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
91981872
Reads aligned (%)
88.7
Duplicates removed (%)
7.5
Number of peaks
3644 (qval < 1E-05)

mm9

Number of total reads
91981872
Reads aligned (%)
88.6
Duplicates removed (%)
7.5
Number of peaks
3618 (qval < 1E-05)

Base call quality data from DBCLS SRA