SRX079886
GSM746580: ChIPinput Ter119+ Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Embryo
Cell type
Embryonic erythroblasts
NA
NA

Attributes by original data submitter

Sample

source_name
Ter119+ cells
strain
CD1
developmental stage/cell type
Mouse fetal liver cells with the late erythroid differentiation marker Ter119; primary erythroblasts
chip antibody target
N/A

Sequenced DNA Library

library_name
GSM746580: ChIPinput_Ter119+_Seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
37209660
Reads aligned (%)
97.0
Duplicates removed (%)
7.9
Number of peaks
583 (qval < 1E-05)

mm9

Number of total reads
37209660
Reads aligned (%)
96.7
Duplicates removed (%)
8.0
Number of peaks
642 (qval < 1E-05)

Base call quality data from DBCLS SRA