Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Gata3

Cell type

Cell type Class
Blood
Cell type
Th2 Cells
MeSH Description
A subset of helper-inducer T-lymphocytes which synthesize and secrete the INTERLEUKINS IL-4; IL-5; IL-6; and IL-10. These cytokines influence B-cell development and antibody production as well as augmenting humoral responses.

Attributes by original data submitter

Sample

source_name
T-helper 2 cells
strain
C57BL/6
cell type
T-helper 2 cells (unstimulated)
chip antibody
anti-Gata3 (558686, BD bioscience)

Sequenced DNA Library

library_name
GSM742023: Th2-Gata3-replicate [ChIP-Seq]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
9675003
Reads aligned (%)
96.0
Duplicates removed (%)
13.3
Number of peaks
3674 (qval < 1E-05)

mm9

Number of total reads
9675003
Reads aligned (%)
95.9
Duplicates removed (%)
13.4
Number of peaks
3662 (qval < 1E-05)

Base call quality data from DBCLS SRA