Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Rbpj

Cell type

Cell type Class
Blood
Cell type
Leukemia, Lymphoid
MeSH Description
Leukemia associated with HYPERPLASIA of the lymphoid tissues and increased numbers of circulating malignant LYMPHOCYTES and lymphoblasts.

Attributes by original data submitter

Sample

source_name
T6E: RBPJ Chromatin IP
cell line
T6E
disease
T lymphoblastic leukemia/lymphoma
cell type
T lymphocyte
antibody
Rabbit anti RBPJ

Sequenced DNA Library

library_name
GSM732914: T6E-RBPJ
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

mm10

Number of total reads
30837607
Reads aligned (%)
65.6
Duplicates removed (%)
11.8
Number of peaks
3578 (qval < 1E-05)

mm9

Number of total reads
30837607
Reads aligned (%)
65.4
Duplicates removed (%)
11.9
Number of peaks
3544 (qval < 1E-05)

Base call quality data from DBCLS SRA