Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Notch1

Cell type

Cell type Class
Blood
Cell type
Leukemia, Lymphoid
MeSH Description
Leukemia associated with HYPERPLASIA of the lymphoid tissues and increased numbers of circulating malignant LYMPHOCYTES and lymphoblasts.

Attributes by original data submitter

Sample

source_name
T6E: Notch1 Chromatin IP
cell line
T6E
disease
T lymphoblastic leukemia/lymphoma
cell type
T lymphocyte
antibody
Rabbit anti Notch1

Sequenced DNA Library

library_name
GSM732913: T6E-Notch1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

mm10

Number of total reads
30756647
Reads aligned (%)
86.3
Duplicates removed (%)
11.4
Number of peaks
4459 (qval < 1E-05)

mm9

Number of total reads
30756647
Reads aligned (%)
86.1
Duplicates removed (%)
11.5
Number of peaks
4448 (qval < 1E-05)

Base call quality data from DBCLS SRA