SRX070889
GSM732911: CUTLL-H3K4me3

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Blood
Cell type
CUTLL1
NA
NA

Attributes by original data submitter

Sample

source_name
CUTLL1: H3K4me3 Chromatin IP
cell line
CUTLL1
disease
T lymphoblastic leukemia/lymphoma
cell type
T lymphocyte
antibody
H3K4me3

Sequenced DNA Library

library_name
GSM732911: CUTLL-H3K4me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
13073705
Reads aligned (%)
92.5
Duplicates removed (%)
10.5
Number of peaks
28938 (qval < 1E-05)

hg19

Number of total reads
13073705
Reads aligned (%)
92.1
Duplicates removed (%)
10.7
Number of peaks
28928 (qval < 1E-05)

Base call quality data from DBCLS SRA