Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me1

Cell type

Cell type Class
Blood
Cell type
CUTLL1
NA
NA

Attributes by original data submitter

Sample

source_name
CUTLL1: H3K4me1 Chromatin IP
cell line
CUTLL1
disease
T lymphoblastic leukemia/lymphoma
cell type
T lymphocyte
antibody
H3K4me1

Sequenced DNA Library

library_name
GSM732910: CUTLL-H3K4me1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
20435165
Reads aligned (%)
96.8
Duplicates removed (%)
7.4
Number of peaks
27809 (qval < 1E-05)

hg19

Number of total reads
20435165
Reads aligned (%)
96.4
Duplicates removed (%)
7.7
Number of peaks
27761 (qval < 1E-05)

Base call quality data from DBCLS SRA