Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
NOTCH1

Cell type

Cell type Class
Blood
Cell type
CUTLL1
NA
NA

Attributes by original data submitter

Sample

source_name
CUTLL1: Notch1 Chromatin IP
cell line
CUTLL1
disease
T lymphoblastic leukemia/lymphoma
cell type
T lymphocyte
antibody
Rabbit anti Notch1

Sequenced DNA Library

library_name
GSM732904: CUTLL-Notch1-2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
21932025
Reads aligned (%)
78.0
Duplicates removed (%)
7.4
Number of peaks
12277 (qval < 1E-05)

hg38

Number of total reads
21932025
Reads aligned (%)
79.3
Duplicates removed (%)
6.4
Number of peaks
12152 (qval < 1E-05)

Base call quality data from DBCLS SRA