SRX070876
GSM730701: GATA2 ChIP-seq A

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GATA2

Cell type

Cell type Class
Cardiovascular
Cell type
HUVEC
Primary Tissue
Umbilical Cord
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
Chromatin IP against GATA2
cell-type
umbilical vein endothelial cells
passage
01/22/2010

Sequenced DNA Library

library_name
GSM730701: GATA2_ChIP-seq_A
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
43880903
Reads aligned (%)
74.5
Duplicates removed (%)
22.1
Number of peaks
16851 (qval < 1E-05)

hg19

Number of total reads
43880903
Reads aligned (%)
73.6
Duplicates removed (%)
23.1
Number of peaks
16859 (qval < 1E-05)

Base call quality data from DBCLS SRA