Antigen

Antigen Class

DNase-seq

Antigen

DNase-Seq

Cell type

Cell type Class

Blood

Cell type

GM06990

Tissue

blood

Lineage

mesoderm

Description

B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah, treatment: Epstein-Barr Virus transformed

Sample

source_name

GM06990

biomaterial_provider

GM06990

cell

GM06990

cell organism

Human

cell description

Lymphoblastoid, International HapMap Project, CEPH/Utah, Treatment: Epstein-Barr Virus transformed

cell karyotype

normal

cell lineage

mesoderm

cell sex

F

replicate

2

Sequenced DNA Library

library_name

GSM736635: Stam_GM06990_2

library_strategy

DNase-Hypersensitivity

library_source

GENOMIC

library_selection

DNase

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

71355328

Reads aligned (%)

40.0

Duplicates removed (%)

36.2

Number of peaks

26870 (qval < 1E-05)

hg19

Number of total reads

71355328

Reads aligned (%)

39.0

Duplicates removed (%)

36.4

Number of peaks

28294 (qval < 1E-05)