Antigen

Antigen Class

DNase-seq

Antigen

DNase-Seq

Cell type

Cell type Class

Blood

Cell type

HL-60

Primary Tissue

Blood

Tissue Diagnosis

Leukemia

Sample

source_name

HL-60

biomaterial_provider

ATCC

cell

HL-60

cell organism

Human

cell description

Human promyelocytic leukemia cells. (PMID: 276884)

cell karyotype

cancer

cell sex

F

replicate

1

Sequenced DNA Library

library_name

GSM736626: Stam_HL-60_1

library_strategy

DNase-Hypersensitivity

library_source

GENOMIC

library_selection

DNase

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

44895175

Reads aligned (%)

92.5

Duplicates removed (%)

25.8

Number of peaks

74966 (qval < 1E-05)

hg19

Number of total reads

44895175

Reads aligned (%)

91.8

Duplicates removed (%)

27.1

Number of peaks

74767 (qval < 1E-05)