Antigen

Antigen Class

DNase-seq

Antigen

DNase-Seq

Cell type

Cell type Class

Cardiovascular

Cell type

HUVEC

Primary Tissue

Umbilical Cord

Tissue Diagnosis

Normal

Sample

source_name

HUVEC

biomaterial_provider

Lonza

cell

HUVEC

cell organism

Human

cell description

Human Umbilical Vein Endothelial Cell

cell karyotype

normal

cell lineage

mesoderm

cell sex

U

replicate

1

Sequenced DNA Library

library_name

GSM736575: Stam_HUVEC_1

library_strategy

DNase-Hypersensitivity

library_source

GENOMIC

library_selection

DNase

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

56123981

Reads aligned (%)

66.2

Duplicates removed (%)

21.7

Number of peaks

53203 (qval < 1E-05)

hg19

Number of total reads

56123981

Reads aligned (%)

65.5

Duplicates removed (%)

23.0

Number of peaks

52859 (qval < 1E-05)