Antigen

Antigen Class

DNase-seq

Antigen

DNase-Seq

Cell type

Cell type Class

Blood

Cell type

K-562

Primary Tissue

Blood

Tissue Diagnosis

Leukemia Chronic Myelogenous

Sample

source_name

K562

biomaterial_provider

ATCC

cell

K562

cell organism

Human

cell description

leukemia

cell karyotype

cancer

cell lineage

"The continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises." - ATCC

cell sex

F

replicate

2

Sequenced DNA Library

library_name

GSM736566: Stam_K562_2

library_strategy

DNase-Hypersensitivity

library_source

GENOMIC

library_selection

DNase

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

59257005

Reads aligned (%)

59.2

Duplicates removed (%)

51.6

Number of peaks

52281 (qval < 1E-05)

hg19

Number of total reads

59257005

Reads aligned (%)

58.8

Duplicates removed (%)

52.8

Number of peaks

52196 (qval < 1E-05)