Antigen

Antigen Class

DNase-seq

Antigen

DNase-Seq

Cell type

Cell type Class

Kidney

Cell type

HRCEpiC

Tissue

epithelium

Lineage

mesoderm

Description

renal cortical epithelial cells

Sample

source_name

HRCEpiC

biomaterial_provider

Lonza

cell

HRCEpiC

cell organism

Human

cell description

Human Renal Cortical Epithelial cells (normal)

cell karyotype

normal

cell lineage

mesoderm

cell sex

U

replicate

1

Sequenced DNA Library

library_name

GSM736549: Stam_HRCEpiC_1

library_strategy

DNase-Hypersensitivity

library_source

GENOMIC

library_selection

DNase

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

32354917

Reads aligned (%)

95.7

Duplicates removed (%)

29.4

Number of peaks

110355 (qval < 1E-05)

hg19

Number of total reads

32354917

Reads aligned (%)

95.2

Duplicates removed (%)

30.1

Number of peaks

110198 (qval < 1E-05)