Antigen

Antigen Class

DNase-seq

Antigen

DNase-Seq

Cell type

Cell type Class

Blood

Cell type

GM12864

Tissue

blood

Lineage

mesoderm

Description

B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, treatment: Epstein-Barr Virus transformed

Sample

source_name

GM12864

biomaterial_provider

GM12864

cell

GM12864

cell organism

Human

cell description

B-Lymphocyte, Lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, Treatment: Epstein-Barr Virus transformed

cell karyotype

unknown

cell lineage

mesoderm

cell sex

M

replicate

1

Sequenced DNA Library

library_name

GSM736525: Stam_GM12864_1

library_strategy

DNase-Hypersensitivity

library_source

GENOMIC

library_selection

DNase

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

17807818

Reads aligned (%)

97.3

Duplicates removed (%)

80.2

Number of peaks

11843 (qval < 1E-05)

hg19

Number of total reads

17807818

Reads aligned (%)

25.5

Duplicates removed (%)

32.2

Number of peaks

12225 (qval < 1E-05)