Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ELK4

Cell type

Cell type Class
Kidney
Cell type
293
Primary Tissue
Kidney
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
Untransformed embryonic kidney cell line
cell line
HEK293
genotype/variation
original cells (non-transformed) from ATCC
harvest date
2009-09-15
chip antibody
rabbit anti-ELK4 (SantaCruz, catalog # sc13030-X)

Sequenced DNA Library

library_name
GSM700361: Endogenous ELK4_HEK93 cells_ChIP-seq_rep2_lane8
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
58726601
Reads aligned (%)
75.6
Duplicates removed (%)
8.1
Number of peaks
1349 (qval < 1E-05)

hg38

Number of total reads
58726601
Reads aligned (%)
77.6
Duplicates removed (%)
6.4
Number of peaks
1150 (qval < 1E-05)

Base call quality data from DBCLS SRA