Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
FOXH1

Cell type

Cell type Class
Pluripotent stem cell
Cell type
hESC H9
NA
NA

Attributes by original data submitter

Sample

source_name
human embryonic stem cells
cell line
H9
cell type
embryonic stem cells
passages
40-50
chip antibody
FOXH1, sheep polyclonal
chip antibody manufacturer
R&D Systems

Sequenced DNA Library

library_name
GSM727564: hESC FOXH1 ChIP-Seq pool
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg19

Number of total reads
15463890
Reads aligned (%)
92.2
Duplicates removed (%)
3.1
Number of peaks
8564 (qval < 1E-05)

hg38

Number of total reads
15463890
Reads aligned (%)
93.4
Duplicates removed (%)
2.3
Number of peaks
8164 (qval < 1E-05)

Base call quality data from DBCLS SRA