Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Crebbp

Cell type

Cell type Class
Blood
Cell type
CD4 CD8 double positive cells
NA
NA

Attributes by original data submitter

Sample

source_name
Primary T-cells
strain
C57BL/6
tissue
thymus
cell type
T cells
developmental stage
CD4+/CD8+ double-positive (DP)
antibody vendor
Abcam
antibody catalog number
ab2832
antibody lot number
725445

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
75832474
Reads aligned (%)
87.4
Duplicates removed (%)
71.6
Number of peaks
1265 (qval < 1E-05)

mm9

Number of total reads
75832474
Reads aligned (%)
87.2
Duplicates removed (%)
71.6
Number of peaks
1378 (qval < 1E-05)

Base call quality data from DBCLS SRA