SRX063924
GSM726989: UAE RNAPII(8WG16, Diagenode) 5 hrs zinc

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Blood
Cell type
Hematopoietic cells
NA
NA

Attributes by original data submitter

Sample

source_name
UAE (leukemic)
cell type
hematopoietic cell
disease state
leukemic
treatment
5 hrs zinc
antibody
RNAPII
antibody vendor
Diagenode
antibody catalog number
8WG16

Sequenced DNA Library

library_name
GSM726989: UAE_RNAPII(8WG16, Diagenode)_5 hrs zinc
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
42504765
Reads aligned (%)
74.4
Duplicates removed (%)
52.0
Number of peaks
8073 (qval < 1E-05)

hg19

Number of total reads
42504765
Reads aligned (%)
73.5
Duplicates removed (%)
53.9
Number of peaks
8029 (qval < 1E-05)

Base call quality data from DBCLS SRA