Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ERG

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562 (leukemic)
cell type
hematopoietic cell
disease state
leukemic
treatment
72 hrs dox
antibody
ERG
antibody vendor
SantaCruz
antibody catalog number
sc353
antibody lot/batch number
C20

Sequenced DNA Library

library_name
GSM726985: K562-ERG_ERG(SantaCruz_sc353_C20)_72hrsdox
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
34983717
Reads aligned (%)
31.4
Duplicates removed (%)
55.3
Number of peaks
14299 (qval < 1E-05)

hg38

Number of total reads
34983717
Reads aligned (%)
32.7
Duplicates removed (%)
53.8
Number of peaks
14333 (qval < 1E-05)

Base call quality data from DBCLS SRA