Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RUNX1

Cell type

Cell type Class
Blood
Cell type
SKNO-1
Primary Tissue
Blood
Tissue Diagnosis
Leukemia

Attributes by original data submitter

Sample

source_name
SKNO-1 (leukemic)
cell type
hematopoietic cell
disease state
leukemic
treatment
no
antibody
RUNX1
antibody vendor
Abcam
antibody catalog number
ab23980
antibody lot/batch number
Gr21798-1

Sequenced DNA Library

library_name
GSM726978: SKNO-1_RUNX1 (Abcam ab23980, Gr21798-1)_no
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
35335161
Reads aligned (%)
37.1
Duplicates removed (%)
52.3
Number of peaks
32932 (qval < 1E-05)

hg38

Number of total reads
35335161
Reads aligned (%)
37.7
Duplicates removed (%)
51.8
Number of peaks
33071 (qval < 1E-05)

Base call quality data from DBCLS SRA