Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Lung
Cell type
Lung
MeSH Description
Either of the pair of organs occupying the cavity of the thorax that effect the aeration of the blood.

Attributes by original data submitter

Sample

source_name
Mouse lung
strain
C57BL/6
chip antibody
H3K4me3
chip antibody details
Millipore, 05-745

Sequenced DNA Library

library_name
GSM722861: RenLab-H3K4me3-lung
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
26753066
Reads aligned (%)
74.8
Duplicates removed (%)
16.5
Number of peaks
33904 (qval < 1E-05)

mm9

Number of total reads
26753066
Reads aligned (%)
74.8
Duplicates removed (%)
16.6
Number of peaks
33965 (qval < 1E-05)

Base call quality data from DBCLS SRA