Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Neural
Cell type
Cerebellum
MeSH Description
The part of brain that lies behind the BRAIN STEM in the posterior base of skull (CRANIAL FOSSA, POSTERIOR). It is also known as the "little brain" with convolutions similar to those of CEREBRAL CORTEX, inner white matter, and deep cerebellar nuclei. Its function is to coordinate voluntary movements, maintain balance, and learn motor skills.

Attributes by original data submitter

Sample

source_name
Mouse cerebellum
strain
C57BL/6
chip antibody
Pol2
chip antibody details
Canvance, MMS-126R

Sequenced DNA Library

library_name
GSM722666: RenLab-Pol2-cerebellum
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
29359578
Reads aligned (%)
52.7
Duplicates removed (%)
11.5
Number of peaks
18932 (qval < 1E-05)

mm9

Number of total reads
29359578
Reads aligned (%)
52.6
Duplicates removed (%)
11.6
Number of peaks
19012 (qval < 1E-05)

Base call quality data from DBCLS SRA