Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Bone Marrow Cells
MeSH Description
Cells contained in the bone marrow including fat cells (see ADIPOCYTES); STROMAL CELLS; MEGAKARYOCYTES; and the immediate precursors of most blood cells.

Attributes by original data submitter

Sample

source_name
Mouse bone marrow
strain
C57BL/6
chip antibody
none (Input)
chip antibody details
None

Sequenced DNA Library

library_name
GSM722640: RenLab-Input-bone-marrow
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
34473446
Reads aligned (%)
66.0
Duplicates removed (%)
8.7
Number of peaks
909 (qval < 1E-05)

mm9

Number of total reads
34473446
Reads aligned (%)
65.9
Duplicates removed (%)
8.7
Number of peaks
1002 (qval < 1E-05)

Base call quality data from DBCLS SRA