Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9K14ac

Cell type

Cell type Class
Cardiovascular
Cell type
HAEC
Primary Tissue
Aorta
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
H3K9/K14ac_ChIPSeq
cell type
primary Human Aortic Endothelial cells (HAEC)
passages
3 to 6
antibody
H3K9/K14ac (Upstate 06-599)
treatment
HG (repeat 2)

Sequenced DNA Library

library_name
GSM723175: HAEC-HG-H3Ac-R2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
39455769
Reads aligned (%)
98.1
Duplicates removed (%)
22.0
Number of peaks
9204 (qval < 1E-05)

hg19

Number of total reads
39455769
Reads aligned (%)
97.3
Duplicates removed (%)
23.4
Number of peaks
8449 (qval < 1E-05)

Base call quality data from DBCLS SRA