SRX062345
GSM722714: DNasel HS non-t(8;21)

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
DNase-seq
Antigen
DNase-Seq

Cell type

Cell type Class
Blood
Cell type
CD34+
NA
NA

Attributes by original data submitter

Sample

source_name
Peripheral blood MNC CD34+ from non-t(8;21) AML patient
cell type
Peripheral blood MNC CD34+
target
DNasel HS
antibody
NA

Sequenced DNA Library

library_name
GSM722714: DNasel_HS_non-t(8;21)
library_strategy
DNase-Hypersensitivity
library_source
GENOMIC
library_selection
DNase

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
36532342
Reads aligned (%)
87.8
Duplicates removed (%)
43.2
Number of peaks
46115 (qval < 1E-05)

hg19

Number of total reads
36532342
Reads aligned (%)
87.4
Duplicates removed (%)
43.9
Number of peaks
46043 (qval < 1E-05)

Base call quality data from DBCLS SRA