Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RUNX1

Cell type

Cell type Class
Blood
Cell type
CD34+
NA
NA

Attributes by original data submitter

Sample

source_name
Peripheral blood MNC CD34+ from non-t(8;21)AML patient
cell type
Peripheral blood MNC CD34+
target
RUNX1
antibody
ab23980 (lot number728911)

Sequenced DNA Library

library_name
GSM722708: RUNX1_non-t(8;21)_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
37707840
Reads aligned (%)
88.4
Duplicates removed (%)
8.5
Number of peaks
40563 (qval < 1E-05)

hg38

Number of total reads
37707840
Reads aligned (%)
89.9
Duplicates removed (%)
7.5
Number of peaks
40625 (qval < 1E-05)

Base call quality data from DBCLS SRA