Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RUNX1

Cell type

Cell type Class
Blood
Cell type
Kasumi-1
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

source_name
Kasumi-1 control (without transfection)
cell type
Kasumi-1
target
RUNX1/ETO
antibody
ETO(C20)sc (lot number F1809)

Sequenced DNA Library

library_name
GSM722705: RUNX1ETO_control_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
13434569
Reads aligned (%)
64.3
Duplicates removed (%)
10.9
Number of peaks
4358 (qval < 1E-05)

hg38

Number of total reads
13434569
Reads aligned (%)
65.3
Duplicates removed (%)
10.1
Number of peaks
4348 (qval < 1E-05)

Base call quality data from DBCLS SRA