Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RUNX1

Cell type

Cell type Class
Blood
Cell type
Kasumi-1
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

source_name
Kasumi-1 control
cell type
Kasumi-1
target
RUNX1
antibody
ab23980 (lot number728911)

Sequenced DNA Library

library_name
GSM722704: RUNX1_Kasumi-1_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
24199467
Reads aligned (%)
85.6
Duplicates removed (%)
4.0
Number of peaks
4041 (qval < 1E-05)

hg38

Number of total reads
24199467
Reads aligned (%)
87.5
Duplicates removed (%)
2.6
Number of peaks
4032 (qval < 1E-05)

Base call quality data from DBCLS SRA