SRX062124
GSM721308: MNAse digested input MB

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Muscle
Cell type
C2C12
Primary Tissue
Skeletal Muscle
Tissue Diagnosis
NOS

Attributes by original data submitter

Sample

source_name
Growing C2C12 myoblasts
cell line
C2C12
cell type
myoblasts
chromatin preparation method
MNase digestion
chip antibody
none

Sequenced DNA Library

library_name
GSM721308: MNAse_digested_input_MB
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
148431357
Reads aligned (%)
68.1
Duplicates removed (%)
16.1
Number of peaks
668 (qval < 1E-05)

mm9

Number of total reads
148431357
Reads aligned (%)
67.9
Duplicates removed (%)
16.0
Number of peaks
698 (qval < 1E-05)

Base call quality data from DBCLS SRA