SRX062123
GSM721307: Sonicated input MT

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Muscle
Cell type
C2C12
Primary Tissue
Skeletal Muscle
Tissue Diagnosis
NOS

Attributes by original data submitter

Sample

source_name
C2C12 myotubes differentiated for 96h
cell line
C2C12
cell type
myotubes
chromatin preparation method
sonication
chip antibody
none

Sequenced DNA Library

library_name
GSM721307: Sonicated_input_MT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
86008497
Reads aligned (%)
81.2
Duplicates removed (%)
21.2
Number of peaks
963 (qval < 1E-05)

mm9

Number of total reads
86008497
Reads aligned (%)
80.9
Duplicates removed (%)
21.1
Number of peaks
1101 (qval < 1E-05)

Base call quality data from DBCLS SRA