SRX059367
GSM714811: NCC NR2F1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
NR2F1

Cell type

Cell type Class
Pluripotent stem cell
Cell type
hESC derived neural crests
NA
NA

Attributes by original data submitter

Sample

source_name
NCC_NR2F1
cell type
Neural crest cells (hNCC) derived from H9 ESC
chip antibody
NR2F1 (PP-H8132-00, Perseus Proteomics)

Sequenced DNA Library

library_name
GSM714811: NCC_NR2F1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
22993884
Reads aligned (%)
91.4
Duplicates removed (%)
6.0
Number of peaks
1679 (qval < 1E-05)

hg19

Number of total reads
22993884
Reads aligned (%)
90.5
Duplicates removed (%)
7.6
Number of peaks
1735 (qval < 1E-05)

Base call quality data from DBCLS SRA