Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
hESC derived neural crests
NA
NA

Attributes by original data submitter

Sample

source_name
NCC_input
cell type
Neural crest cells (hNCC) derived from H9 ESC
chip antibody
--

Sequenced DNA Library

library_name
GSM714805: NCC_input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
23393896
Reads aligned (%)
84.9
Duplicates removed (%)
2.1
Number of peaks
480 (qval < 1E-05)

hg19

Number of total reads
23393896
Reads aligned (%)
84.3
Duplicates removed (%)
3.4
Number of peaks
741 (qval < 1E-05)

Base call quality data from DBCLS SRA