Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
rpc-1

Cell type

Cell type Class
Larvae
Cell type
L3
NA
NA

Attributes by original data submitter

Sample

source_name
whole body
tissue
whole body
strain
N2
Stage
L3
chip antibody
SDQ4663_RPC1
chip antibody supplier
SDI

Sequenced DNA Library

library_name
GSM713174: seq-SDQ4663_RPC1_N2_MXemb_1_A_EE8
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

ce11

Number of total reads
3133532
Reads aligned (%)
98.7
Duplicates removed (%)
64.8
Number of peaks
1710 (qval < 1E-05)

ce10

Number of total reads
3133532
Reads aligned (%)
98.7
Duplicates removed (%)
64.8
Number of peaks
1708 (qval < 1E-05)

Base call quality data from DBCLS SRA