Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
sdc-3

Cell type

Cell type Class
Larvae
Cell type
L3
NA
NA

Attributes by original data submitter

Sample

source_name
whole body
tissue
whole body
strain
N2
Stage
L3
chip antibody
JL00002 SDC3
chip antibody supplier
Covance

Sequenced DNA Library

library_name
GSM713142: seq-JL00002_SDC3_N2_L3_3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

ce10

Number of total reads
7751700
Reads aligned (%)
54.3
Duplicates removed (%)
37.9
Number of peaks
1056 (qval < 1E-05)

ce11

Number of total reads
7751700
Reads aligned (%)
54.3
Duplicates removed (%)
37.9
Number of peaks
1056 (qval < 1E-05)

Base call quality data from DBCLS SRA