SRX059240
GSM713136: seq-JA00011 LIN35 N2 L3 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
lin-35

Cell type

Cell type Class
Larvae
Cell type
L3
NA
NA

Attributes by original data submitter

Sample

source_name
whole body
tissue
whole body
strain
N2
Stage
L3
chip antibody
JA00011 LIN35
chip antibody supplier
Covance

Sequenced DNA Library

library_name
GSM713136: seq-JA00011_LIN35_N2_L3_2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
7976699
Reads aligned (%)
61.7
Duplicates removed (%)
10.4
Number of peaks
2315 (qval < 1E-05)

ce10

Number of total reads
7976699
Reads aligned (%)
61.7
Duplicates removed (%)
10.4
Number of peaks
2309 (qval < 1E-05)

Base call quality data from DBCLS SRA