SRX059234
GSM712810: seq-BH00005 LIN9 N2 L3 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
lin-9

Cell type

Cell type Class
Larvae
Cell type
L3
NA
NA

Attributes by original data submitter

Sample

source_name
whole body
tissue
whole body
strain
N2
Stage
L3
chip antibody
BH00005 LIN9
chip antibody supplier
Bob Horvitz

Sequenced DNA Library

library_name
GSM712810: seq-BH00005_LIN9_N2_L3_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

ce10

Number of total reads
3402069
Reads aligned (%)
73.2
Duplicates removed (%)
12.3
Number of peaks
1941 (qval < 1E-05)

ce11

Number of total reads
3402069
Reads aligned (%)
73.2
Duplicates removed (%)
12.3
Number of peaks
1940 (qval < 1E-05)

Base call quality data from DBCLS SRA