Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
lin-54

Cell type

Cell type Class
Larvae
Cell type
L3
NA
NA

Attributes by original data submitter

Sample

source_name
whole body
tissue
whole body
strain
N2
Stage
L3
chip antibody
BH00004_LIN54
chip antibody supplier
Bob Horvitz

Sequenced DNA Library

library_name
GSM712713: seq-BH00004_LIN54_N2_L3_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

ce11

Number of total reads
2456763
Reads aligned (%)
81.1
Duplicates removed (%)
15.4
Number of peaks
1881 (qval < 1E-05)

ce10

Number of total reads
2456763
Reads aligned (%)
81.1
Duplicates removed (%)
15.4
Number of peaks
1881 (qval < 1E-05)

Base call quality data from DBCLS SRA