SRX054534
GSM692423: S2 input DNA rep2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S2 cells
chip antibody
none
cell line
S2

Sequenced DNA Library

library_name
GSM692423: S2 input DNA rep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
17747019
Reads aligned (%)
77.7
Duplicates removed (%)
37.8
Number of peaks
3074 (qval < 1E-05)

dm3

Number of total reads
17747019
Reads aligned (%)
78.0
Duplicates removed (%)
34.5
Number of peaks
3115 (qval < 1E-05)

Base call quality data from DBCLS SRA