SRX050608
GSM694134: SG Orc ChIP-Seq extraction2 seq1 aliquote 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Orc2

Cell type

Cell type Class
Larvae
Cell type
Salivary glands
NA
NA

Attributes by original data submitter

Sample

source_name
SG Orc ChIP-Seq extraction2_seq1 channel_1
strain
SuUR - Orr-Weaver(official name : SuUR genotype : SuUR mutant outcross : 3 tags : Transposon tag : GFP description : SuUR mutant as maintained by the Orr-Weaver lab. made_by : Orr-Weaver )
tissue
salivary gland
developmental stage
L3 stage wandering larvae
genotype
SuUR mutant

Sequenced DNA Library

library_name
GSM694134: SG Orc ChIP-Seq extraction2_seq1 aliquote 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
22573162
Reads aligned (%)
73.2
Duplicates removed (%)
42.2
Number of peaks
7127 (qval < 1E-05)

dm3

Number of total reads
22573162
Reads aligned (%)
73.5
Duplicates removed (%)
42.1
Number of peaks
7085 (qval < 1E-05)

Base call quality data from DBCLS SRA