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Install and launch IGV before selecting data to visualize
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: Orc2
wikigenes
PDBj
CellType: Salivary glands
ATCC
MeSH
RIKEN BRC
SRX050607
GSM694133: SG Orc ChIP-Seq extraction1 seq1 aliquote 2
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
Orc2
Cell type
Cell type Class
Larvae
Cell type
Salivary glands
NA
NA
Attributes by original data submitter
Sample
source_name
SG Orc ChIP-Seq extraction1_seq1 channel_2
strain
Oregon-R(official name : Oregon-R-modENCODE genotype : wild type )
tissue
salivary gland
developmental stage
L3 stage wandering larvae
genotype
wild type
Sequenced DNA Library
library_name
GSM694133: SG Orc ChIP-Seq extraction1_seq1 aliquote 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer
Where can I get the processing logs?
Read processing pipeline
log
dm6
Number of total reads
20877767
Reads aligned (%)
89.7
Duplicates removed (%)
14.9
Number of peaks
0 (qval < 1E-05)
dm3
Number of total reads
20877767
Reads aligned (%)
89.8
Duplicates removed (%)
14.8
Number of peaks
0 (qval < 1E-05)
Base call quality data from
DBCLS SRA