Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
ZHBTc4 ES cells
chip antibody
None
cell type
Embryonic stem cells

Sequenced DNA Library

library_name
GSM687289: WCE-DMSO-t0_ChipSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
21567926
Reads aligned (%)
80.7
Duplicates removed (%)
36.8
Number of peaks
10392 (qval < 1E-05)

mm9

Number of total reads
21567926
Reads aligned (%)
80.3
Duplicates removed (%)
36.9
Number of peaks
10190 (qval < 1E-05)

Base call quality data from DBCLS SRA