Curated Sample Data


Genome
ce10
Antigen Class
TFs and others
Antigen
mep-1
Cell type Class
Embryo
Cell type
Embryos

Cell type information


NA
NA

Attributes by Original Data Submitter


source_name
Snyder_MEP-1_GFP_emb_rep1 extraction1_seq1 channel_1
strain
OP70(made_by : R Waterston tags : GFP::3xFlag mutagen : Bombard genotype : unc119(ed3);wgIs70(mep-1::TY1 EGFP FLAG C;unc119) official name : WBGene00003218 )
developmental stage
embryo
genotype
unc119(ed3);wgIs70(mep-1::TY1 EGFP FLAG C;unc119)
Sex
Hermaphrodite

Metadata from Sequence Read Archive

Library Description


library_name
GSM677659: Snyder_MEP-1_GFP_emb_rep1 extraction1_seq1 aliquote 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Platform Information


instrument_model
Illumina Genome Analyzer

External Database Query

Logs in read processing pipeline


Number of total reads
4095660
Reads aligned (%)
20.8
Duplicates removed (%)
2.1
Number of peaks
71 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA