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For ce11
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For ce10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For ce11
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For ce10
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For ce11
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For ce10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: RNA polymerase II
wikigenes
PDBj
CellType: Young adult
ATCC
MeSH
RIKEN BRC
SRX043966
GSM677650: Snyder N2 POLII YA rep2 extraction2 seq1 aliquote 2
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
RNA polymerase
Antigen
RNA polymerase II
Cell type
Cell type Class
Adult
Cell type
Young adult
NA
NA
Attributes by original data submitter
Sample
source_name
Snyder_N2_POLII_YA_rep2 extraction2_seq1 channel_2
strain
N2(genotype : wild type genotype : DR subclone of DB original (Tc1 pattern I) official name : N2 )
developmental stage
Young Adult
genotype
wild type
Sex
hermaphrodite
Sequenced DNA Library
library_name
GSM677650: Snyder_N2_POLII_YA_rep2 extraction2_seq1 aliquote 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer
Where can I get the processing logs?
Read processing pipeline
log
ce11
Number of total reads
3599010
Reads aligned (%)
64.1
Duplicates removed (%)
14.2
Number of peaks
1221 (qval < 1E-05)
ce10
Number of total reads
3599010
Reads aligned (%)
64.1
Duplicates removed (%)
14.2
Number of peaks
1220 (qval < 1E-05)
Base call quality data from
DBCLS SRA